Table of Contents
Editorial (p. 4)
Michael Lawrence
Contributed Research Articles
multipleNCC: Inverse Probability Weighting of Nested Case- Control Data (p. 5)
Nathalie C. Støer, Sven Ove Samuelsen
QPot: An R Package for Stochastic Differential Equation Quasi-Potential Analysis (p. 19)
Christopher M. Moore, Christopher R. Stieha, Ben C. Nolting, Maria K. Cameron, Karen C. Abbott
Design of the TRONCO BioConductor Package for TRanslational ONCOlogy (p. 39)
Marco Antoniotti, Giulio Caravagna, Luca De Sano, Alex Graudenzi, Giancarlo Mauri, Bud Mishra, Daniele Ramazzotti
diverse: an R Package to Analyze Diversity in Complex Systems (p. 60)
Miguel R. Guevara, Dominik Hartmann, Marcelo Mendoza
Simulating Correlated Binary and Multinomial Responses under Marginal Model Specification: The SimCorMultRes Package (p. 79)
Anestis Touloumis
eiCompare: Comparing Ecological Inference Estimates across EI and EI:RC (p. 92)
Loren Collingwood, Kassra Oskooii, Sergio Garcia-Rios, Matt Barreto
rnrfa: An R package to Retrieve, Filter and Visualize Data from the UK National River Flow Archive (p. 102)
Claudia Vitolo, Matthew Fry, Wouter Buytaert
Qtools: A Collection of Models and Tools for Quantile Inference (p. 117)
Marco Geraci
Two-Tier Latent Class IRT Models in R (p. 139)
Silvia Bacci, Francesco Bartolucci
Variants of Simple Correspondence Analysis (p. 167)
Rosaria Lombardo, Eric J. Beh
hdm: High-Dimensional Metrics (p. 185)
Victor Chernozhukov, Chris Hansen, Martin Spindler
Normal Tolerance Interval Procedures in the tolerance Package (p. 200)
Derek S. Young
easyROC: An Interactive Web-tool for ROC Curve Analysis Using R Language Environment (p. 213)
Dincer Goksuluk, Selcuk Korkmaz, Gokmen Zararsiz, A. Ergun Karaagaoglu
tigris: An R Package to Access and Work with Geographic Data from the US Census Bureau (p. 231)
Kyle Walker
Escape from Boxland (p. 243)
Barret Schloerke, Hadley Wickham, Dianne Cook, Heike Hofmann
Ake: An R Package for Discrete and Continuous Associated Kernel Estimations (p. 258)
Wanbitching E. Wansouwé, Sobom M. Somé, Célestin C. Kokonendji
An Introduction to Principal Surrogate Evaluation with the pseval Package (p. 277)
Michael C. Sachs, Erin E. Gabriel
Calculating Biological Module Enrichment or Depletion and Visualizing Data on Large-scale Molecular Maps with ACSNMineR and RNaviCell Packages (p. 293)
Paul Deveau, Emmanuel Barillot, Valentina Boeva, Andrei Zinovyev, Eric Bonnet
Subgroup Discovery with Evolutionary Fuzzy Systems in R: The SDEFSR Package (p. 307)
Ángel M. García, Francisco Charte, Pedro González, Cristóbal J. Carmona, María J. del Jesus
dCovTS: Distance Covariance/Correlation for Time Series (p. 324)
Maria Pitsillou, Konstantinos Fokianos
comf: An R Package for Thermal Comfort Studies (p. 341)
Marcel Schweiker
water: Tools and Functions to Estimate Actual Evapotranspiration Using Land Surface Energy Balance Models in R (p. 352)
Guillermo Federico Olmedo, Samuel Ortega-Farías, Daniel de la Fuente-Sáiz, David Fonseca- Luego, Fernando Fuentes-Peñailillo
quantreg.nonpar: An R Package for Performing Nonparametric Series Quantile Regression (p. 370)
Michael Lipsitz, Alexandre Belloni, Victor Chernozhukov, Iván Fernández-Val
nmfgpu4R: GPU-Accelerated Computation of the Non-Negative Matrix Factorization (NMF) Using CUDA Capable Hardware (p. 382)
Sven Koitka, Christoph M. Friedrich
Computing Pareto Frontiers and Database Preferences with the rPref Package (p. 393)
Patrick Roocks
micompr: An R Package for Multivariate Independent Comparison of Observations (p. 405)
Nuno Fachada, João Rodrigues, Vitor V. Lopes, Rui C. Martins, Agostinho C. Rosa
mixtox: An R Package for Mixture Toxicity Assessment (p. 421)
Xiang-Wei Zhu, Jian-Yi Chen
Weighted Distance Based Discriminant Analysis: The R Package WeDiBaDis (p. 434)
Itziar Irigoien, Francesc Mestres, Concepcion Arenas
Distance Measures for Time Series in R: The TSdist Package (p. 451)
Usue Mori, Alexander Mendiburu, Jose A. Lozano
condSURV: An R Package for the Estimation of the Conditional Survival Function for Ordered Multivariate Failure Time Data (p. 460)
Luis Meira-Machado, Marta Sestelo
ggfortify: Unified Interface to Visualize Statistical Results of Popular R Packages (p. 474)
Yuan Tang, Masaaki Horikoshi, Wenxuan Li
Measurement Units in R (p. 486)
Edzer Pebesma, Thomas Mailund, James Hiebert
mctest: An R Package for Detection of Collinearity among Regressors (p. 495)
Muhammad Imdadullah, Muhammad Aslam, Saima Altaf
News and Notes
News from the Bioconductor Project (p. 510)
Bioconductor Core Team
Changes in R (pp. 511-514)
The R Core Team
Changes on CRAN (pp. 507-509)
Kurt Hornik, Achim Zeileis
R Foundation News (p. 506)
Torsten Hothorn